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Transferability of neural network clinical deidentification systems.

Kahyun LeeNicholas J DobbinsBridget McInnesMeliha YetisgenÖzlem Uzuner
Published in: Journal of the American Medical Informatics Association : JAMIA (2022)
Transferability from a single external source gave inconsistent results. Using additional external sources consistently yielded an F1-score of approximately 80%. Fine-tuning emerged as a dominant transfer strategy, with or without domain generalization. We also found that external sources were useful even in cases where in-domain training data were available. Transferability across institutions differed by note type and annotation label but resulted in improved performance.
Keyphrases
  • neural network
  • drinking water
  • air pollution
  • machine learning
  • rna seq
  • artificial intelligence