Login / Signup

Construction and Analysis of Protein-Protein Interaction Network of Heroin Use Disorder.

Shaw-Ji ChenDing-Lieh LiaoChia-Hsiang ChenTse-Yi WangKuang-Chi Chen
Published in: Scientific reports (2019)
Heroin use disorder (HUD) is a complex disease resulting from interactions among genetic and other factors (e.g., environmental factors). The mechanism of HUD development remains unknown. Newly developed network medicine tools provide a platform for exploring complex diseases at the system level. This study proposes that protein-protein interactions (PPIs), particularly those among proteins encoded by casual or susceptibility genes, are extremely crucial for HUD development. The giant component of our constructed PPI network comprised 111 nodes with 553 edges, including 16 proteins with large degree (k) or high betweenness centrality (BC), which were further identified as the backbone of the network. JUN with the largest degree was suggested to be central to the PPI network associated with HUD. Moreover, PCK1 with the highest BC and MAPK14 with the secondary largest degree and 9th highest BC might be involved in the development HUD and other substance diseases.
Keyphrases
  • protein protein
  • small molecule
  • genome wide
  • signaling pathway
  • squamous cell carcinoma
  • high throughput
  • oxidative stress
  • wastewater treatment
  • gene expression
  • dna methylation
  • transcription factor
  • high density