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Advances in genomics, transcriptomics and proteomics of toxin-producing cyanobacteria.

Paul M D'AgostinoJason N WoodhouseA Katharina MakowerAnna C Y YeungSarah E OngleyMelinda L MicallefMichelle C MoffittBrett A Neilan
Published in: Environmental microbiology reports (2016)
A common misconception persists that the genomes of toxic and non-toxic cyanobacterial strains are largely conserved with the exception of the presence or absence of the genes responsible for toxin production. Implementation of -omics era technologies has challenged this paradigm, with comparative analyses providing increased insight into the differences between strains of the same species. The implementation of genomic, transcriptomic and proteomic approaches has revealed distinct profiles between toxin-producing and non-toxic strains. Further, metagenomics and metaproteomics highlight the genomic potential and functional state of toxic bloom events over time. In this review, we highlight how these technologies have shaped our understanding of the complex relationship between these molecules, their producers and the environment at large within which they persist.
Keyphrases
  • escherichia coli
  • single cell
  • rna seq
  • primary care
  • healthcare
  • quality improvement
  • copy number
  • genome wide
  • risk assessment
  • climate change
  • human health
  • genetic diversity