ATP-dependent polymerization dynamics of bacterial actin proteins involved in <i>Spiroplasma</i> swimming.
Daichi TakahashiIkuko FujiwaraYuya SasajimaAkihiro NaritaKatsumi ImadaMakoto MiyataPublished in: Open biology (2022)
MreB is a bacterial protein belonging to the actin superfamily. This protein polymerizes into an antiparallel double-stranded filament that determines cell shape by maintaining cell wall synthesis. <i>Spiroplasma eriocheiris</i>, a helical wall-less bacterium, has five MreB homologous (SpeMreB1-5) that probably contribute to swimming motility. Here, we investigated the structure, ATPase activity and polymerization dynamics of SpeMreB3 and SpeMreB5. SpeMreB3 polymerized into a double-stranded filament with possible antiparallel polarity, while SpeMreB5 formed sheets which contained the antiparallel filament, upon nucleotide binding. SpeMreB3 showed slow P<sub>i</sub> release owing to the lack of an amino acid motif conserved in the catalytic centre of MreB family proteins. Our SpeMreB3 crystal structures and analyses of SpeMreB3 and SpeMreB5 variants showed that the amino acid motif probably plays a role in eliminating a nucleophilic water proton during ATP hydrolysis. Sedimentation assays suggest that SpeMreB3 has a lower polymerization activity than SpeMreB5, though their polymerization dynamics are qualitatively similar to those of other actin superfamily proteins, in which pre-ATP hydrolysis and post-P<sub>i</sub> release states are unfavourable for them to remain as filaments.
Keyphrases
- amino acid
- binding protein
- cell wall
- cell migration
- single cell
- dna damage
- gene expression
- transcription factor
- dna repair
- anaerobic digestion
- cell therapy
- stem cells
- high throughput
- oxidative stress
- genome wide identification
- small molecule
- dna binding
- atomic force microscopy
- escherichia coli
- endoplasmic reticulum
- single molecule