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Complete chloroplast genome sequence of Stauntonia hexaphylla (Ranunculales: Lardizabalaceae), a species endemic to Korea.

Yonguk KimJawon ShinDong-Wook KimHak-Sung LeeChulyung Choi
Published in: Mitochondrial DNA. Part B, Resources (2021)
The complete chloroplast (cp) genome of Stauntonia hexaphylla, a monotypic genus native to Korea, was determined. The whole cp genome is 158,390 bp in size, containing a large single-copy (LSC) region of 87,115 bp and a small single-copy region (SSC) of 18,928 bp, separated by a pair of inverted repeats (IRs) of 26,174 bp. The cp genome encodes 117 genes, including 79 protein-coding, 38 tRNA-coding, and 8 rRNA-coding genes. The overall GC content is 37.8%. A phylogenetic analysis demonstrated a close relationship between S. hexaphylla and S. obovatifoliola subsp. urophylla. The cp genome will provide new insight into the evolution of Lardizabalaceae.
Keyphrases
  • genome wide
  • dna methylation
  • arabidopsis thaliana
  • bioinformatics analysis
  • small molecule
  • high resolution
  • liquid chromatography
  • solid phase extraction