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An inosine triphosphate pyrophosphatase safeguards plant nucleic acids from aberrant purine nucleotides.

Henryk StraubeJannis StraubeJannis RinneLisa FischerMarkus NiehausClaus-Peter WitteMarco Herde
Published in: The New phytologist (2022)
- In plants, inosine is enzymatically introduced in some tRNAs but not in other RNAs or DNA. Nonetheless, our data show that RNA and DNA from Arabidopsis thaliana contain (deoxy)inosine, probably derived from non-enzymatic adenosine deamination in nucleic acids and usage of (deoxy)inosine triphosphate (dITP and ITP) during nucleic acid synthesis. - We combined biochemical approaches, LC-MS, as well as RNA-Seq to characterize a plant INOSINE TRIPHOSPHATE PYROPHOSPHATASE (ITPA) from Arabidopsis thaliana, which is conserved in many organisms, and investigated the sources of deaminated purine nucleotides in plants. - ITPA dephosphorylates deaminated nucleoside di- and triphosphates to the respective monophosphates. ITPA loss-of-function causes inosine di- and triphosphate accumulation in vivo and an elevated inosine and deoxyinosine content in RNA and DNA respectively, as well as salicylic acid (SA) accumulation, early senescence and upregulation of transcripts associated with immunity and senescence. Cadmium-induced oxidative stress and biochemical inhibition of the INOSINE MONOPHOSPHATE DEHYDROGENASE leads to more IDP and ITP in the wildtype, and this effect is enhanced in itpa mutants, suggesting that ITP originates from ATP deamination and IMP phosphorylation. - ITPA is part of a molecular protection system in plants, preventing accumulation of (d)ITP and its usage for nucleic acid synthesis.
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