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Transcriptome-wide mining, characterization, and development of microsatellite markers in Lychnis kiusiana (Caryophyllaceae).

Seongjun ParkSungwon SonMyungju ShinNoriyuki FujiiTakuji HoshinoSeonJoo Park
Published in: BMC plant biology (2019)
The transcriptomic SSR markers of Lychnis kiusiana provide a valuable resource for understanding the population genetics, evolutionary history, and effective conservation management of this species. Furthermore, the identified microsatellite loci linked to the annotated genes should be useful for developing functional markers of L. kiusiana. The developed markers represent a potentially valuable source of transcriptomic SSR markers for population genetic analyses with moderate levels of cross-taxon portability.
Keyphrases
  • genome wide
  • single cell
  • genetic diversity
  • rna seq
  • dna methylation
  • high intensity
  • transcription factor
  • genome wide identification