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The complete mitochondrial genome of Trematomus loennbergii (Perciformes, Nototheniidae).

Eunkyung ChoiTae-Eul ImSeung-Jae LeeEuna JoJinmu KimSun Hee KimYoung Min ChiJeong-Hoon KimHyun Park
Published in: Mitochondrial DNA. Part B, Resources (2021)
The complete mitochondrial genome of Trematomus loennbergii was studied using NGS technology with PacBio platform. The mitochondrial genome size was 19,374bp and it had 13 protein-coding genes, 22 tRNAs and 2 rRNAs. There were 4 types of stop codons which were TAA, TAG, AGG and T(AA) but start codon type was only one (ATG). The contents of GC were 44.09% and AT contents were 55.91%. To conduct phylogenetic analysis, 12 species in 3 families were used. The result suggested that T. loennbergii was close to Pagothenia borchgrevinki in Nototheniidae. This study would provide a fundamental data for molecular evolution of T. loennbergii.
Keyphrases
  • genome wide
  • oxidative stress
  • dna methylation
  • high throughput
  • electronic health record
  • big data
  • binding protein
  • artificial intelligence
  • deep learning
  • bioinformatics analysis
  • transcription factor