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ETDB-Caltech: A blockchain-based distributed public database for electron tomography.

Davi R OrtegaCatherine M OikonomouH Jane DingPrudence Rees-Leenull nullGeorge J Lu
Published in: PloS one (2019)
Three-dimensional electron microscopy techniques like electron tomography provide valuable insights into cellular structures, and present significant challenges for data storage and dissemination. Here we explored a novel method to publicly release more than 11,000 such datasets, more than 30 TB in total, collected by our group. Our method, based on a peer-to-peer file sharing network built around a blockchain ledger, offers a distributed solution to data storage. In addition, we offer a user-friendly browser-based interface, https://etdb.caltech.edu, for anyone interested to explore and download our data. We discuss the relative advantages and disadvantages of this system and provide tools for other groups to mine our data and/or use the same approach to share their own imaging datasets.
Keyphrases
  • electron microscopy
  • electronic health record
  • big data
  • high resolution
  • healthcare
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  • machine learning
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  • fluorescence imaging