Deep Learning Based Automatic Left Ventricle Segmentation from the Transgastric Short-Axis View on Transesophageal Echocardiography: A Feasibility Study.
Yuan TianWenting QinZihang ZhaoChunrong WangYajie TianYue-Lun ZhangKai HeYuguan ZhangLe ShenZhuhuang ZhouChunhua YuPublished in: Diagnostics (Basel, Switzerland) (2024)
Segmenting the left ventricle from the transgastric short-axis views (TSVs) on transesophageal echocardiography (TEE) is the cornerstone for cardiovascular assessment during perioperative management. Even for seasoned professionals, the procedure remains time-consuming and experience-dependent. The current study aims to evaluate the feasibility of deep learning for automatic segmentation by assessing the validity of different U-Net algorithms. A large dataset containing 1388 TSV acquisitions was retrospectively collected from 451 patients (32% women, average age 53.42 years) who underwent perioperative TEE between July 2015 and October 2023. With image preprocessing and data augmentation, 3336 images were included in the training set, 138 images in the validation set, and 138 images in the test set. Four deep neural networks (U-Net, Attention U-Net, UNet++, and UNeXt) were employed for left ventricle segmentation and compared in terms of the Jaccard similarity coefficient (JSC) and Dice similarity coefficient (DSC) on the test set, as well as the number of network parameters, training time, and inference time. The Attention U-Net and U-Net++ models performed better in terms of JSC (the highest average JSC: 86.02%) and DSC (the highest average DSC: 92.00%), the UNeXt model had the smallest network parameters (1.47 million), and the U-Net model had the least training time (6428.65 s) and inference time for a single image (101.75 ms). The Attention U-Net model outperformed the other three models in challenging cases, including the impaired boundary of left ventricle and the artifact of the papillary muscle. This pioneering exploration demonstrated the feasibility of deep learning for the segmentation of the left ventricle from TSV on TEE, which will facilitate an accelerated and objective alternative of cardiovascular assessment for perioperative management.
Keyphrases
- deep learning
- convolutional neural network
- pulmonary hypertension
- artificial intelligence
- pulmonary artery
- machine learning
- mitral valve
- working memory
- cardiac surgery
- patients undergoing
- computed tomography
- end stage renal disease
- neural network
- left ventricular
- big data
- chronic kidney disease
- coronary artery
- ms ms
- multiple sclerosis
- newly diagnosed
- pulmonary arterial hypertension
- congenital heart disease
- single cell
- magnetic resonance
- magnetic resonance imaging
- skeletal muscle
- mass spectrometry
- left atrial appendage
- electronic health record
- minimally invasive
- heart failure
- atrial fibrillation
- adipose tissue
- insulin resistance
- patient reported
- clinical evaluation