Tourmaline: A containerized workflow for rapid and iterable amplicon sequence analysis using QIIME 2 and Snakemake.

Luke R Thompson Sean R Anderson Paul A Den Uyl Nastassia V Patin Shen Jean Lim Grant Sanderson Kelly D Goodwin

Published in: GigaScience (2022)

Automated workflows like Tourmaline enable rapid analysis of environmental amplicon data, decreasing the time from data generation to actionable results. Tourmaline is available for download at github.com/aomlomics/tourmaline.

Keyphrases

electronic health record
big data
loop mediated isothermal amplification
machine learning
deep learning
data analysis
risk assessment
artificial intelligence
human health
sensitive detection
single cell