Halogen Bonding Involving Isomeric Isocyanide/Nitrile Groups.
Andrey S SmirnovEugene A KatlenokAlexander S MikherdovMariya A KryukovaNadezhda A BokachVadim Yu KukushkinPublished in: International journal of molecular sciences (2023)
2,3,5,6-Tetramethyl-1,4-diisocyanobenzene ( 1 ), 1,4-diisocyanobenzene ( 2 ), and 1,4-dicyanobenzene ( 3 ) were co-crystallized with 1,3,5-triiodotrifluorobenzene (1,3,5-FIB) to give three cocrystals, 1 ·1,3,5-FIB, 2 ·2(1,3,5-FIB), and 3 ·2(1,3,5-FIB), which were studied by X-ray diffraction. A common feature of the three structures is the presence of I···C isocyanide or I···N nitrile halogen bonds (HaBs), which occurs between an iodine σ-hole and the isocyanide C-(or the nitrile N-) atom. The diisocyanide and dinitrile cocrystals 2 ·2(1,3,5-FIB) and 3 ·2(1,3,5-FIB) are isostructural, thus providing a basis for accurate comparison of the two types of noncovalent linkages of C≡N/N≡C groups in the composition of structurally similar entities and in one crystal environment. The bonding situation was studied by a set of theoretical methods. Diisocyanides are more nucleophilic than the dinitrile and they exhibit stronger binding to 1,3,5-FIB. In all structures, the HaBs are mostly determined by the electrostatic interactions, but the dispersion and induction components also provide a noticeable contribution and make the HaBs attractive. Charge transfer has a small contribution (<5%) to the HaB and it is higher for the diisocyanide than for the dinitrile systems. At the same time, diisocyanide and dinitrile structures exhibit typical electron-donor and π-acceptor properties in relation to the HaB donor.