The Existence of at Least Three Genomic Signature Patterns and at Least Seven Subtypes of COVID-19 and the End of the Disease.
Zhengjun ZhangPublished in: Vaccines (2022)
Hoping to find genomic clues linked to COVID-19 and end the pandemic has driven scientists' tremendous efforts to try all kinds of research. Signs of progress have been achieved but are still limited. This paper intends to prove the existence of at least three genomic signature patterns and at least seven subtypes of COVID-19 driven by five critical genes (the smallest subset of genes) using three blood-sampled datasets. These signatures and subtypes provide crucial genomic information in COVID-19 diagnosis (including ICU patients), research focuses, and treatment methods. Unlike existing approaches focused on gene fold-changes and pathways, gene-gene nonlinear and competing interactions are the driving forces in finding the signature patterns and subtypes. Furthermore, the method leads to high accuracy with hospitalized patients, showing biological and mathematical equivalences between COVID-19 status and the signature patterns and a methodological advantage over other methods that cannot lead to high accuracy. As a result, as new biomarkers, the new findings and genomic clues can be much more informative than other findings for interpreting biological mechanisms, developing the second (third) generation of vaccines, antiviral drugs, and treatment methods, and eventually bringing new hopes of an end to the pandemic.
Keyphrases
- coronavirus disease
- sars cov
- copy number
- genome wide
- respiratory syndrome coronavirus
- genome wide identification
- end stage renal disease
- chronic kidney disease
- dna methylation
- ejection fraction
- intensive care unit
- healthcare
- newly diagnosed
- combination therapy
- gene expression
- acute respiratory distress syndrome
- quality improvement
- genome wide analysis
- single cell
- mechanical ventilation