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Genome-wide genetic screening with chemically mutagenized haploid embryonic stem cells.

Josep V FormentMareike HerzogJulia CoatesTomasz KonopkaBianca V GappSebastian M NijmanDavid J AdamsThomas M KeaneStephen P Jackson
Published in: Nature chemical biology (2016)
In model organisms, classical genetic screening via random mutagenesis provides key insights into the molecular bases of genetic interactions, helping to define synthetic lethality, synthetic viability and drug-resistance mechanisms. The limited genetic tractability of diploid mammalian cells, however, precludes this approach. Here, we demonstrate the feasibility of classical genetic screening in mammalian systems by using haploid cells, chemical mutagenesis and next-generation sequencing, providing a new tool to explore mammalian genetic interactions.
Keyphrases
  • genome wide
  • copy number
  • embryonic stem cells
  • dna methylation
  • crispr cas
  • gene expression
  • cell cycle arrest
  • gram negative
  • neural network