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Reverse Stable Isotope Labelling with Raman Spectroscopy for Microbial Proteomics.

Jiro KarloAshish Kumar DhillonSoumik SiddhantaSurya Pratap Singh
Published in: Journal of biophotonics (2023)
Global proteome changes in microbes affect the survival and overall production of commercially relevant metabolites through different bioprocesses. The existing methods to monitor proteome level changes are destructive in nature. Stable isotope probing coupled with Raman spectroscopy is a relatively new approach for proteome analysis. However, applying this approach for monitoring changes in a large culture volume is not cost-effective. In this study, for the first time we are presenting a novel method of combining reverse stable isotope probing using 13 C-glucose and Deuterium to monitor the proteome changes through Raman spectroscopy. The findings of the study revealed visible changes (blue shifts) in proteome related peaks that can be used for monitoring proteome dynamics i.e., synthesis of nascent amino acids and its turnover with time in a non-destructive, cost-effective, and label-free manner. This article is protected by copyright. All rights reserved.
Keyphrases
  • raman spectroscopy
  • label free
  • molecular dynamics simulations
  • mass spectrometry
  • microbial community
  • ms ms
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