Metabolic route computation in organism communities.
Markus KrummenackerMario LatendressePeter D KarpPublished in: Microbiome (2019)
Our tool quickly found plausible routes for the discussed multi-organism route-finding problems. The routes shed light on how diverse organisms cooperate to perform multi-step metabolic transformations. Our tool enables scientists to consider multiple alternative routes and identifies the organisms responsible for each reaction.