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Metabolic route computation in organism communities.

Markus KrummenackerMario LatendressePeter D Karp
Published in: Microbiome (2019)
Our tool quickly found plausible routes for the discussed multi-organism route-finding problems. The routes shed light on how diverse organisms cooperate to perform multi-step metabolic transformations. Our tool enables scientists to consider multiple alternative routes and identifies the organisms responsible for each reaction.
Keyphrases
  • gram negative
  • mental health
  • genome wide
  • gene expression
  • multidrug resistant
  • dna methylation