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Characterization of the complete chloroplast genome of Syringa wolfii.

Jing LiuPeipei XiongWenpei WangWenqi WangWenting ZhangYan QinJiuli Wang
Published in: Mitochondrial DNA. Part B, Resources (2020)
Syringa wolfii (Syringa: Syringeae), an upright shrub, is ornamental species used in urban greenification. In this study, we determined the complete chloroplast (cp) genome of S. wolfii using next-generation sequencing (NGS). The size of the chloroplast genome is 156,571 bp in length, including a large single-copy region (LSC) of 86,684 bp, a small single-copy region (SSC) of 19,109 bp, and a pair of inverted repeat (IR) regions with 25,362 bp. The GC content of the chloroplast genome was 37.95%. Moreover, a total of 131 functional genes were annotated, including 87 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. The neighbor-joining phylogenetic tree suggested that S. wolfii was closely related to S. yunnansis.
Keyphrases
  • genome wide
  • dna methylation
  • genome wide identification
  • arabidopsis thaliana
  • bioinformatics analysis
  • copy number
  • oxidative stress
  • small molecule
  • transcription factor
  • binding protein
  • mass spectrometry