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LAMP-enabled diagnosis of Kaposi's sarcoma for sub-Saharan Africa.

Duncan McCloskeyAggrey SemeereRacheal AyangaMiriam Laker-OkettaRobert LukandeMatthew SemakaddeMicheal KanyesigyeMegan WengerPhilip LeBoitTimothy McCalmontToby MaurerAndrea L GardnerJuan BozaEthel CesarmanJeffrey N MartinDavid Carl Erickson
Published in: Science advances (2023)
Kaposi's sarcoma (KS) is an endothelial cancer caused by the Kaposi's sarcoma-associated herpesvirus (KSHV) and is one of the most common cancers in sub-Saharan Africa. In limited-resource settings, traditional pathology infrastructure is often insufficient for timely diagnosis, leading to frequent diagnoses at advanced-stage disease where survival is poor. In this study, we investigate molecular diagnosis of KS performed in a point-of-care device to circumvent the limited infrastructure for traditional diagnosis. Using 506 mucocutaneous biopsies collected from patients at three HIV clinics in Uganda, we achieved 97% sensitivity, 92% specificity, and 96% accuracy compared to gold standard U.S.-based pathology. The results presented in this manuscript show that LAMP-based quantification of KSHV DNA extracted from KS-suspected biopsies has the potential to serve as a successful diagnostic for the disease and that diagnosis may be accurately achieved using a point-of-care device, reducing the barriers to obtaining KS diagnosis while increasing diagnostic accuracy.
Keyphrases
  • primary care
  • squamous cell carcinoma
  • hepatitis c virus
  • single molecule
  • free survival
  • structural basis
  • nucleic acid