Bridging Flocculation of a Sterically Stabilized Cationic Latex as a Biosensor for the Detection of Microbial DNA after Amplification via PCR.
Elisabeth TrinhLauren J BattQi YueRuiling DuSamuel T JonesLee A FieldingPublished in: Biomacromolecules (2024)
There is a high demand for rapid, sensitive, and accurate detection methods for pathogens. This paper demonstrates a method of detecting the presence of amplified DNA from a range of pathogens associated with serious infections including Gram-negative bacteria, Gram-positive bacteria, and viruses. DNA is amplified using a polymerase chain reaction (PCR) and consequently detected using a sterically stabilized, cationic polymer latex. The DNA induces flocculation of this cationic latex, which consequently leads to rapid sedimentation and a visible change from a milky-white dispersion to one with a transparent supernatant, presenting a clear visible change, indicating the presence of amplified DNA. Specifically, a number of different pathogens were amplified using conventional or qPCR, including Staphylococcus aureus , Escherichia coli , and Herpes Simplex Virus (HSV-2). This method was demonstrated to detect the presence of bacteria in suspension concentrations greater than 380 CFU mL -1 and diagnose the presence of specific genomes through primer selection, as exemplified using methicillin resistant and methicillin susceptible Staphylococcus aureus . The versatility of this methodology was further demonstrated by showing that false positive results do not occur when a PCR of fungal DNA from C. albicans is conducted using bacterial universal primers.
Keyphrases
- staphylococcus aureus
- circulating tumor
- cell free
- single molecule
- nucleic acid
- escherichia coli
- loop mediated isothermal amplification
- herpes simplex virus
- gram negative
- real time pcr
- label free
- biofilm formation
- methicillin resistant staphylococcus aureus
- circulating tumor cells
- mass spectrometry
- quantum dots
- candida albicans
- microbial community
- cystic fibrosis
- high resolution
- case report