High resolution 3D visualization of the spinal cord in a post-mortem murine model.
Inna BukreevaVictor AsadchikovAlexey BuzmakovMarina ChukalinaAnastasya IngachevaNikolay A KorolevAlberto BravinAlberto MittoneGabriele E M BiellaAlejandra SierraFrancesco BrunLorenzo MassimiMichela FratiniAlessia CedolaPublished in: Biomedical optics express (2020)
A crucial issue in the development of therapies to treat pathologies of the central nervous system is represented by the availability of non-invasive methods to study the three-dimensional morphology of spinal cord, with a resolution able to characterize its complex vascular and neuronal organization. X-ray phase contrast micro-tomography enables a high-quality, 3D visualization of both the vascular and neuronal network simultaneously without the need of contrast agents, destructive sample preparations or sectioning. Until now, high resolution investigations of the post-mortem spinal cord in murine models have mostly been performed in spinal cords removed from the spinal canal. We present here post-mortem phase contrast micro-tomography images reconstructed using advanced computational tools to obtain high-resolution and high-contrast 3D images of the fixed spinal cord without removing the bones and preserving the richness of micro-details available when measuring exposed spinal cords. We believe that it represents a significant step toward the in-vivo application.
Keyphrases
- spinal cord
- high resolution
- magnetic resonance
- neuropathic pain
- spinal cord injury
- contrast enhanced
- deep learning
- mass spectrometry
- electron microscopy
- convolutional neural network
- optical coherence tomography
- tandem mass spectrometry
- magnetic resonance imaging
- single molecule
- machine learning
- computed tomography
- brain injury
- blood brain barrier