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Theoretical Study on the Biosynthesis of the Mandapamates: Mechanistic Insights Using Density Functional Theory.

Di WangGerald PattendenKam Loon FowMichael J StocksJonathan D HirstBencan Tang
Published in: The Journal of organic chemistry (2024)
Density functional theory (B3LYP-D3(BJ) and ωB97XD) calculations have been used to assess the stereochemical outcomes of the proposed transannular [4 + 2] cycloaddition pathway for the biosynthesis of mandapamate and isomandapamate from macrocyclic intermediates. Calculations reveal that the topological shift between macrocyclic conformers is vital in controlling the stereoselectivity of the downstream steps toward the isomeric mandapamates. A stepwise 4 + 2 type process is energetically favored over a concerted [4 + 2] pathway at room temperature, and is consistent with the stereochemistries found in the natural products.
Keyphrases
  • density functional theory
  • room temperature
  • molecular dynamics
  • ionic liquid
  • cell wall
  • genome wide
  • single cell
  • adipose tissue
  • dna methylation