STON: exploring biological pathways using the SBGN standard and graph databases.

Vasundra TouréAlexander MazeinDagmar WaltemathIrina BalaurMansoor SaqiRon HenkelJohann PelletCharles Auffray

Published in: BMC bioinformatics (2016)

STON exploits the power of graph databases to store and query complex biological pathways. This advances the possibility of: i) identifying subnetworks in a given pathway; ii) linking networks across different levels of granularity to address difficulties related to incomplete knowledge representation at single level; and iii) identifying common patterns between pathways in the database.

Keyphrases

healthcare
neural network
convolutional neural network
emergency department
machine learning
artificial intelligence
adverse drug
electronic health record