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Defining type 2 diabetes polygenic risk scores through colocalization and network-based clustering of metabolic trait genetic associations.

Samuel GhatanJeroen van RooijMandy van HoekCindy G BoerJanine F FelixMaryam KavousiVincent W JaddoeEric J G SijbrandsCarolina Medina-GomezFernando RivadeneiraLing Oei
Published in: Genome medicine (2024)
We successfully partitioned T2D genetic variants into phenotypic pathways using a colocalization first approach. Partitioned PRSs were associated to unique metabolic and clinical outcomes indicating successful partitioning of disease heterogeneity. Our work expands on previous approaches by providing stronger inferences of shared causal variants, causality, and directionality of GWAS variant-trait associations.
Keyphrases
  • genome wide
  • type diabetes
  • copy number
  • single cell
  • dna methylation
  • rna seq
  • cardiovascular disease
  • glycemic control
  • insulin resistance
  • adverse drug
  • emergency department
  • metabolic syndrome
  • weight loss
  • skeletal muscle