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Molecular characterization of Morogoro maize-associated virus, a nucleorhabdovirus detected in maize (Zea mays) in Tanzania.

David Alan ReadJonathan FeatherstonDavid Jasper Gilbert ReesGenevieve Dawn ThompsonRonel RobertsBradley Charles FlettKingstone MashingaidzeGerhard PietersenBarnabas KiulaAlois KullayaErnest R Mbega
Published in: Archives of virology (2019)
RNAtag-seq of maize samples collected in Tanzania revealed the presence of a previously undescribed nucleorhabdovirus, tentatively named "Morogoro maize-associated virus" (MMaV), in three samples. The MMaV genome is 12,185-12,187 nucleotides long and shares a 69-70% nucleotide sequence identity with taro vein chlorosis virus. Annotation of the genomes showed a typical nucleorhabdovirus gene organization. PCR was unable to detect the same virus in the remaining 35 samples collected in the region.
Keyphrases
  • genome wide
  • rna seq
  • transcription factor