Login / Signup

Chromosome-level genome assembly of the cottony cushion scale Icerya purchasi.

Jun DengLin ZhangHui ZhangXubo WangXiaolei Huang
Published in: Scientific data (2024)
The cottony cushion scale, Icerya purchasi, a polyphagous pest, poses a significant threat to the global citrus industry. The hermaphroditic self-fertilization observed in I. purchasi is an exceptionally rare reproductive mode among insects. In this study, we successfully assembled a chromosome-level genome sequence for I. purchasi using PacBio long-reads and the Hi-C technique, resulting in a total size of 1,103.38 Mb and a contig N50 of 12.81 Mb. The genome comprises 14,046 predicted protein-coding genes, with 462,722,633 bp occurrence of repetitive sequences. BUSCO analysis revealed a completeness score of 93.20%. The genome sequence of I. purchasi serves as a crucial resource for comprehending the reproductive modes in insects, with particular emphasis on hermaphroditic self-fertilization.
Keyphrases
  • genome wide
  • copy number
  • high frequency
  • dna methylation
  • amino acid
  • gene expression
  • protein protein
  • transcription factor
  • data analysis
  • genetic diversity