What Is the Exact Contribution of PITX1 and TBX4 Genes in Clubfoot Development? An Italian Study.
Anna Monica BiancoGiulia RagusaValentina Di CarloFlavio FaletraMariateresa Di StazioCostantina RacanoGiovanni TrisolinoStefania CappellaniMaurizio De PellegrinIgnazio d'AddettaGiuseppe CarluccioSergio MonforteAntonio AndreacchioDaniela DibelloAdamo Pio D'AdamoPublished in: Genes (2022)
Congenital clubfoot is a common pediatric malformation that affects approximately 0.1% of all births. 80% of the cases appear isolated, while 20% can be secondary or associated with complex syndromes. To date, two genes that appear to play an important role are PTIX1 and TBX4 , but their actual impact is still unclear. Our study aimed to evaluate the prevalence of pathogenic variants in PITX1 and TBX4 in Italian patients with idiopathic clubfoot. PITX1 and TBX4 genes were analyzed by sequence and SNP array in 162 patients. We detected only four nucleotide variants in TBX4 , predicted to be benign or likely benign. CNV analysis did not reveal duplications or deletions involving both genes and intragenic structural variants. Our data proved that the idiopathic form of congenital clubfoot was rarely associated with mutations and CNVs on PITX1 and TBX4 . Although in some patients, the disease was caused by mutations in both genes; they were responsible for only a tiny minority of cases, at least in the Italian population. It was not excluded that other genes belonging to the same TBX4-PITX1 axis were involved, even if genetic complexity at the origin of clubfoot required the involvement of other factors.
Keyphrases
- genome wide
- copy number
- end stage renal disease
- genome wide identification
- bioinformatics analysis
- newly diagnosed
- ejection fraction
- dna methylation
- chronic kidney disease
- peritoneal dialysis
- genome wide analysis
- risk factors
- electronic health record
- high resolution
- transcription factor
- young adults
- high density
- big data
- patient reported