Comprehensive analysis of microbial content in whole-genome sequencing samples from The Cancer Genome Atlas project.

Yuchen Ge Jennifer Lu Daniela Puiu Mahler Revsine Steven L Salzberg

Published in: bioRxiv : the preprint server for biology (2024)

Analysis of microbial content in 5,734 whole-genome sequencing samples from TCGA yields a comprehensive new resource for investigating the role of microbes in cancer.

Keyphrases

papillary thyroid
squamous cell
microbial community
lymph node metastasis
gene expression
squamous cell carcinoma
single cell
childhood cancer
genome wide
young adults