Predmoter-cross-species prediction of plant promoter and enhancer regions.

Felicitas Kindel Sebastian Triesch Urte SchlüterLaura Alexandra RandarevitchVanessa Reichel-DelandAndreas P M WeberAlisandra K Denton

Published in: Bioinformatics advances (2024)

The source code for Predmoter is available at: https://github.com/weberlab-hhu/Predmoter. Predmoter takes a fasta file as input and outputs h5, and optionally bigWig and bedGraph files.

Keyphrases

transcription factor
dna methylation
binding protein
gene expression
cell wall
plant growth