Methoxylated flavonols from Vellozia dasypus Seub ethyl acetate active myeloperoxidase extract: in vitro and in silico assays.
Verônica M AlmeidaÊuder R DiasBruno Cruz de SouzaJorddy Nevez CruzCleydson B R SantosFranco Henrique Andrade LeiteRaphael F QueirozAlexsandro BrancoPublished in: Journal of biomolecular structure & dynamics (2021)
This study aimed to evaluate the effect of a methoxylated fraction from Vellozia dasypus Seub on myeloperoxidase (MPO)-chlorinating activity and subsequent in silico assays for binding profile prediction. Therefore, the ethyl acetate extract of aerial parts from Vellozia dasypus Seub was fractionated on open-column chromatography containing SiO2 and eluted with solvent in crescent polarity to yield a fraction with a mixture of flavonols quercetin 3-O-methyl ether (1) and 6-C-methyl quercetin 3-O-methyl ether (2). Their chemical structures were proposed by HPLC coupled to photodiode array (HPLC-DAD) and mass spectrometer using electrospray ionization multistage analysis (HPLC-MS/MS). The fraction enriched with compounds 1 and 2 inhibited more efficiently the in vitro MPO-chlorinating activity (IC50 = 40 µg/mL) than the ethyl acetate extract (IC50 = 64.0 µg/mL). Molecular docking studies revealed that these compounds interact with MPO active pocket similarly to trifluoromethyl-substituted aromatic hydroxamate, a well-known MPO inhibitor, co-crystallized at the MPO binding site (PDB ID: 4C1M). Molecular dynamics trajectories confirmed that these two molecules interact with the MPO binding site with a similar energetic pattern when compared to the crystallographic ligand. Taken together, these data expand the sources of phenolic natural compounds that may be further investigated against inflammation-related diseases.Communicated by Ramaswamy H. Sarma.
Keyphrases
- ms ms
- molecular docking
- molecular dynamics
- ionic liquid
- simultaneous determination
- oxidative stress
- high performance liquid chromatography
- liquid chromatography tandem mass spectrometry
- molecular dynamics simulations
- high throughput
- high resolution
- mass spectrometry
- solid phase extraction
- tandem mass spectrometry
- liquid chromatography
- ultra high performance liquid chromatography
- density functional theory
- anti inflammatory
- minimally invasive
- high speed
- drinking water
- small cell lung cancer
- electronic health record
- atomic force microscopy
- gas chromatography
- amino acid
- big data
- artificial intelligence
- case control
- deep learning
- high resolution mass spectrometry