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Data on whole genome sequencing of the oomycete Pythium insidiosum strain CBS 101555 from a horse with pythiosis in Brazil.

Theerapong KrajaejunWeerayuth KittichotiratPreecha PatumcharoenpolThidarat RujirawatTassanee LohnooWanta Yingyong
Published in: BMC research notes (2018)
In this study, we report genome sequence of the P. insidiosum strain CBS 101555, isolated from a horse with pythiosis in Brazil. One paired-end (180-bp insert) library of processed genomic DNA was prepared for Illumina HiSeq 2500-based sequencing. Assembly of raw reads provided genome size of 48.9 Mb, comprising 60,602 contigs. A total of 23,254 genes were predicted and classified into 18,305 homologous gene clusters. Compared with the reference genome (the P. insidiosum strain Pi-S), 1,475,337 sequence variants (SNPs and INDELs) were identified in the organism. The genome sequence data has been deposited in DDBJ under the accession numbers BCFP01000001-BCFP01060602.
Keyphrases
  • genome wide
  • copy number
  • dna methylation
  • electronic health record
  • big data
  • dna damage
  • genome wide identification
  • machine learning
  • dna repair
  • amino acid
  • single molecule