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DASPfind: new efficient method to predict drug-target interactions.

Wail Ba-AlawiOthman SoufanMagbubah EssackPanos KalnisVladimir B Bajic
Published in: Journal of cheminformatics (2016)
DASPfind is a computational method for finding reliable new interactions between drugs and proteins. We show over six different DTI datasets that DASPfind outperforms other state-of-the-art methods when the single top-ranked predictions are considered, or when a drug with no known targets or with few known targets is considered. We illustrate the usefulness and practicality of DASPfind by predicting novel DTIs for the Ion Channel dataset. The validated predictions suggest that DASPfind can be used as an efficient method to identify correct DTIs, thus reducing the cost of necessary experimental verifications in the process of drug discovery. DASPfind can be accessed online at: http://www.cbrc.kaust.edu.sa/daspfind.Graphical abstractThe conceptual workflow for predicting drug-target interactions using DASPfind.
Keyphrases
  • drug discovery
  • drug induced
  • adverse drug
  • social media
  • healthcare
  • emergency department
  • electronic health record
  • rna seq
  • white matter
  • single cell