Draft Genome Sequence of a Clinical Enterococcus faecium Sequence Type 18 Strain from South Africa.
Nontombi Marylucy MbelleNontuthuko Excellent ManingiVhudzani TshisevheLesedi ModipaneDaniel Gyamfi AmoakoJohn Osei SekyerePublished in: Genome announcements (2017)
We report the first draft genome sequence of an Enterococcus faecium sequence type 18 (ST18) strain isolated from a tuberculosis patient in Africa. The genome is comprised of 3,202,539 bp, 501 contigs, 37.70% GC content, 3,202 protein-encoding genes, and 61 RNA genes. The resistome and virulome of this important pathogen are presented herein.
Keyphrases
- genome wide
- south africa
- biofilm formation
- amino acid
- mycobacterium tuberculosis
- bioinformatics analysis
- case report
- genome wide identification
- candida albicans
- hiv positive
- emergency department
- binding protein
- escherichia coli
- pulmonary tuberculosis
- gene expression
- protein protein
- transcription factor
- men who have sex with men
- hepatitis c virus
- pseudomonas aeruginosa
- cystic fibrosis
- adverse drug
- antiretroviral therapy