Electrogenetic signaling and information propagation for controlling microbial consortia via programmed lysis.
Eric VanArsdaleAli NavidMonica J ChuTiffany M HalvorsenGregory F PayneYongqin JiaoWilliam E BentleyMimi C YungPublished in: Biotechnology and bioengineering (2023)
To probe signal propagation and genetic actuation in microbial consortia, we have coopted the components of both redox and quorum sensing (QS) signaling into a communication network for guiding composition by "programming" cell lysis. Here, we use an electrode to generate hydrogen peroxide as a redox cue that determines consortia composition. The oxidative stress regulon of Escherichia coli, OxyR, is employed to receive and transform this signal into a QS signal that coordinates the lysis of a subpopulation of cells. We examine a suite of information transfer modalities including "monoculture" and "transmitter-receiver" models, as well as a series of genetic circuits that introduce time-delays for altering information relay, thereby expanding design space. A simple mathematical model aids in developing communication schemes that accommodate the transient nature of redox signals and the "collective" attributes of QS signals. We suggest this platform methodology will be useful in understanding and controlling synthetic microbial consortia for a variety of applications, including biomanufacturing and biocontainment.
Keyphrases
- hydrogen peroxide
- microbial community
- induced apoptosis
- escherichia coli
- oxidative stress
- health information
- nitric oxide
- genome wide
- electron transfer
- single cell
- high throughput
- cell therapy
- copy number
- stem cells
- endoplasmic reticulum stress
- ischemia reperfusion injury
- cystic fibrosis
- social media
- healthcare
- pseudomonas aeruginosa
- dna methylation
- quantum dots
- antiretroviral therapy
- gene expression
- cell proliferation
- carbon nanotubes
- blood brain barrier
- staphylococcus aureus
- multidrug resistant
- diabetic rats