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Little hope for the polyploid endemic Pyrenean Larkspur ( Delphinium montanum ): Evidences from population genomics and Ecological Niche Modeling.

Pascaline SalvadoPere Aymerich BoixaderJosep PareraAlbert Vila BonfillMaria MartinCéline QuélennecJean-Marc LewinValérie Delorme-HinouxJoris A M Bertrand
Published in: Ecology and evolution (2022)
Species endemic to restricted geographical ranges represent a particular conservation issue, be it for their heritage interest. In a context of global change, this is particularly the case for plants which belong to high-mountain ecosystems and, because of their ecological requirements, are doomed to survive or disappear on their "sky islands". The Pyrenean Larkspur ( Delphinium montanum , Ranunculaceae) is endemic to the Eastern part of the Pyrenees (France and Spain). It is now only observable at a dozen of localities and some populations show signs of decline, such as a recurrent lack of flowering. Implementing population genomics approach (e.g., RAD-seq like) is particularly useful to understand genomic patterns of diversity and differentiation in order to provide recommendations in term of conservation. However, it remains challenging for species such as D .  montanum that are autotetraploid with a large genome size (1C-value >10 pg) as most methods currently available were developed for diploid species. A Bayesian framework able to call genotypes with uncertainty allowed us to assess genetic diversity and population structure in this system. Our results show evidence for inbreeding (mean G IS  = 0.361) within all the populations and substantial population structure (mean G ST  = 0.403) at the metapopulation level. In addition to a lack of connectivity between populations, spatial projections of Ecological Niche Modeling (ENM) analyses under different climatic scenarios predict a dramatic decrease of suitable habitat for D .  montanum in the future. Based on these results, we discuss the relevance and feasibility of different conservation measures.
Keyphrases
  • genetic diversity
  • climate change
  • single cell
  • human health
  • genome wide
  • rna seq
  • dna damage
  • preterm infants
  • south africa
  • risk assessment
  • copy number
  • current status
  • functional connectivity
  • dna repair