A pangenome-guided manually curated library of transposable elements for Zymoseptoria tritici.

Published in: BMC research notes (2023)

A TE consensus library for Z. tritici formatted for use with RepeatMasker. This data is relevant to other researchers investigating TE-host evolutionary dynamics in Z. tritici or who are interested in comparative studies of the fungal kingdom. Further, this TE library can be used to improve gene annotation. Finally, this TE library increases the number of manually curated TE datasets, providing resources to further our understanding of TE diversity.

Keyphrases

genome wide
gene expression
machine learning
copy number
dna methylation
clinical practice
artificial intelligence
single cell
case control
cell wall