Time-resolved spectroscopic and electrophysiological data reveal insights in the gating mechanism of anion channelrhodopsin.
Max-Aylmer DreierPhilipp AlthoffMohamad Javad NorahanStefan Alexander TennigkeitSamir F El-MashtolyMathias LübbenCarsten KöttingTill RudackKlaus GerwertPublished in: Communications biology (2021)
Channelrhodopsins are widely used in optogenetic applications. High photocurrents and low current inactivation levels are desirable. Two parallel photocycles evoked by different retinal conformations cause cation-conducting channelrhodopsin-2 (CrChR2) inactivation: one with efficient conductivity; one with low conductivity. Given the longer half-life of the low conducting photocycle intermediates, which accumulate under continuous illumination, resulting in a largely reduced photocurrent. Here, we demonstrate that for channelrhodopsin-1 of the cryptophyte Guillardia theta (GtACR1), the highly conducting C = N-anti-photocycle was the sole operating cycle using time-resolved step-scan FTIR spectroscopy. The correlation between our spectroscopic measurements and previously reported electrophysiological data provides insights into molecular gating mechanisms and their role in the characteristic high photocurrents. The mechanistic importance of the central constriction site amino acid Glu-68 is also shown. We propose that canceling out the poorly conducting photocycle avoids the inactivation observed in CrChR2, and anticipate that this discovery will advance the development of optimized optogenetic tools.
Keyphrases
- molecular docking
- amino acid
- electronic health record
- computed tomography
- big data
- single molecule
- ionic liquid
- small molecule
- high resolution
- neuropathic pain
- magnetic resonance imaging
- optical coherence tomography
- diabetic retinopathy
- machine learning
- transcranial magnetic stimulation
- working memory
- magnetic resonance
- spinal cord
- gene expression
- mass spectrometry
- dna methylation
- high frequency
- single cell
- genome wide
- molecular dynamics simulations
- optic nerve
- spinal cord injury