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In silico prediction of the metabolism of Blastocrithidia nonstop, a trypanosomatid with non-canonical genetic code.

Fred R OpperdoesKristína ZáhonováIngrid Škodová-SverákováBarbora BučkováĽubomíra ChmelováJulius LukešVyacheslav Yurchenko
Published in: BMC genomics (2024)
In an unusual comparison of metabolism between a parasitic protist with a massively altered genetic code and its close relatives that rely on a canonical code we showed that the dramatic differences on the level of nucleic acids do not seem to be reflected in the metabolisms. Moreover, although the genome of B. nonstop is extremely AT-rich, we could not find any alterations of its pyrimidine synthesis pathway when compared to other trypanosomatids. Hence, we conclude that the dramatic alteration of the genetic code of B. nonstop has no significant repercussions on the metabolism of this flagellate.
Keyphrases
  • genome wide
  • copy number
  • dna methylation