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Compacta: a fast contig clustering tool for de novo assembled transcriptomes.

Fernando G Razo-MendivilOctavio MartínezCorina Hayano-Kanashiro
Published in: BMC genomics (2020)
Compacta is a fast and flexible algorithm for the determination of optimum contig sets that represent the transcriptome for downstream analyses.
Keyphrases
  • single cell
  • rna seq
  • machine learning
  • deep learning
  • solid phase extraction
  • molecularly imprinted
  • neural network
  • solid state
  • tandem mass spectrometry