Phytocompounds as potential inhibitors of mycobacterial multidrug efflux pump Rv1258c: an in silico approach.
Santasree Sarma BiswasJayanti Datta RoyPublished in: AMB Express (2024)
The number of infections and deaths caused by multidrug resistant (MDR) tuberculosis is increasing globally. One of the efflux pumps, that makes Mycobacterium tuberculosis resistant to a number of antibiotics and results in unfavourable treatment results is Tap or Rv1258c. In our study, we tried to utilize a rational drug design technique using in silico approach to look for an efficient and secure efflux pump inhibitor (EPI) against Rv1258c. The structure of Rv1258c was built using the homology modeling tool MODELLER 9.24. 210 phytocompounds were used for blind and site-specific ligand docking against the modelled structure of Rv1258c using AutoDock Vina software. The best docked plant compounds were further analysed for druglikeness and toxicity. In addition to having excellent docking scores, two plant compounds-ellagic acid and baicalein-also exhibited highly desirable drug-like qualities. These substances outperform more well-known EPIs like piperine and verapamil in terms of effectiveness. This data shows that these two compounds might be further investigated for their potential as Rv1258c inhibitors.
Keyphrases
- cystic fibrosis
- mycobacterium tuberculosis
- pseudomonas aeruginosa
- multidrug resistant
- pulmonary tuberculosis
- molecular dynamics
- drug resistant
- molecular dynamics simulations
- systematic review
- acinetobacter baumannii
- molecular docking
- oxidative stress
- protein protein
- machine learning
- drinking water
- hiv aids
- risk assessment
- mass spectrometry
- hiv infected
- artificial intelligence
- replacement therapy
- human immunodeficiency virus
- drug induced
- big data
- single molecule