Self-Assembly of a Novel Pentapeptide into Hydrogelated Dendritic Architecture: Synthesis, Properties, Molecular Docking and Prospective Applications.
Stefania-Claudia JitaruAndra-Cristina EnacheCorneliu CojocaruGabi DrochioiuBrîndușa Alina PetreVasile Robert GradinaruPublished in: Gels (Basel, Switzerland) (2024)
Currently, ultrashort oligopeptides consisting of fewer than eight amino acids represent a cutting-edge frontier in materials science, particularly in the realm of hydrogel formation. By employing solid-phase synthesis with the Fmoc/tBu approach, a novel pentapeptide, FEYNF-NH 2 , was designed, inspired by a previously studied sequence chosen from hen egg-white lysozyme (FESNF-NH 2 ). Qualitative peptide analysis was based on reverse-phase high performance liquid chromatography (RP-HPLC), while further purification was accomplished using solid-phase extraction (SPE). Exact molecular ion confirmation was achieved by matrix-assisted laser desorption-ionization mass spectrometry (MALDI-ToF MS) using two different matrices (HCCA and DHB). Additionally, the molecular ion of interest was subjected to tandem mass spectrometry (MS/MS) employing collision-induced dissociation (CID) to confirm the synthesized peptide structure. A combination of research techniques, including Fourier-transform infrared spectroscopy (FTIR), fluorescence analysis, transmission electron microscopy, polarized light microscopy, and Congo red staining assay, were carefully employed to glean valuable insights into the self-assembly phenomena and gelation process of the modified FEYNF-NH 2 peptide. Furthermore, molecular docking simulations were conducted to deepen our understanding of the mechanisms underlying the pentapeptide's supramolecular assembly formation and intermolecular interactions. Our study provides potential insights into amyloid research and proposes a novel peptide for advancements in materials science. In this regard, in silico studies were performed to explore the FEYNF peptide's ability to form polyplexes.
Keyphrases
- high performance liquid chromatography
- molecular docking
- solid phase extraction
- tandem mass spectrometry
- mass spectrometry
- liquid chromatography
- ultra high performance liquid chromatography
- simultaneous determination
- ms ms
- liquid chromatography tandem mass spectrometry
- gas chromatography
- molecularly imprinted
- molecular dynamics simulations
- gas chromatography mass spectrometry
- high resolution
- single molecule
- room temperature
- high resolution mass spectrometry
- amino acid
- drug delivery
- energy transfer
- public health
- high throughput
- climate change
- endothelial cells
- case control
- label free