Label-free nanofluidic scattering microscopy of size and mass of single diffusing molecules and nanoparticles.
Barbora ŠpačkováHenrik Klein MobergJoachim FritzscheJohan TenghamnGustaf SjöstenHana Šípová-JungováDavid AlbinssonQuentin LubartDaniel van LeeuwenFredrik WesterlundDaniel MidtvedtElin K EsbjörnerMikael KällGiovanni VolpeChristoph LanghammerPublished in: Nature methods (2022)
Label-free characterization of single biomolecules aims to complement fluorescence microscopy in situations where labeling compromises data interpretation, is technically challenging or even impossible. However, existing methods require the investigated species to bind to a surface to be visible, thereby leaving a large fraction of analytes undetected. Here, we present nanofluidic scattering microscopy (NSM), which overcomes these limitations by enabling label-free, real-time imaging of single biomolecules diffusing inside a nanofluidic channel. NSM facilitates accurate determination of molecular weight from the measured optical contrast and of the hydrodynamic radius from the measured diffusivity, from which information about the conformational state can be inferred. Furthermore, we demonstrate its applicability to the analysis of a complex biofluid, using conditioned cell culture medium containing extracellular vesicles as an example. We foresee the application of NSM to monitor conformational changes, aggregation and interactions of single biomolecules, and to analyze single-cell secretomes.
Keyphrases
- label free
- high resolution
- single molecule
- single cell
- molecular dynamics simulations
- molecular dynamics
- magnetic resonance
- healthcare
- high throughput
- computed tomography
- electronic health record
- mass spectrometry
- atomic force microscopy
- solid phase extraction
- optical coherence tomography
- monte carlo
- walled carbon nanotubes