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lwreg: A Lightweight System for Chemical Registration and Data Storage.

Gregory A LandrumJessica BraunPaul KatzbergerMarc T LehnerSereina Riniker
Published in: Journal of chemical information and modeling (2024)
Here, we present lwreg, a lightweight, yet flexible chemical registration system supporting the capture of both two-dimensional molecular structures (topologies) and three-dimensional conformers. lwreg is open source, with a simple Python API, and is designed to be easily integrated into computational workflows. In addition to lwreg itself, we also introduce a straightforward schema for storing experimental data and metadata in the registration database. This direct connection between compound structural information and data generated using those structures creates a powerful tool for data analysis and experimental reproducibility. The software is available at and installable directly from https://github.com/rinikerlab/lightweight-registration.
Keyphrases
  • data analysis
  • electronic health record
  • big data
  • high resolution
  • machine learning
  • mass spectrometry
  • social media