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Plasmid profile analysis of Escherichia coli and Salmonella enterica isolated from pigs, pork and humans.

Jiratchaya PuangsereeRangsiya PrathanSongsak SrisangaSunpetch AngkittitrakulRungtip Chuanchuen
Published in: Epidemiology and infection (2022)
This study aimed to determine the epidemiology and association of antimicrobial resistance (AMR) among Escherichia coli and Salmonella in Thailand. The E. coli ( n = 1047) and Salmonella ( n = 816) isolates from pigs, pork and humans were screened for 18 replicons including HI1, HI2, I1- γ , X, L/M, N, FIA, FIB, W, Y, P, FIC, A/C, T, FIIAs, F, K and B/O using polymerase chain reaction-based replicon typing. The E. coli ( n = 26) and Salmonella ( n = 3) isolates carrying IncF family replicons, ESBL and/or mcr genes were determined for FAB formula. IncF represented the major type of plasmids. Sixteen and eleven Inc groups were identified in E. coli (85.3%) and Salmonella (25.7%), respectively. The predominant replicon patterns between E. coli and Salmonella were IncK-F (23.7%) and IncF (46.2%). Significant correlations ( P < 0.05) were observed between plasmid-replicon type and resistance phenotype. Plasmid replicon types were significantly different among sources of isolates and sampling periods. The most common FAB types between E. coli and Salmonella were F2:A-:B- (30.8%) and S1:A-:B- (66.7%), respectively. In conclusion, various plasmids present in E. coli and Salmonella . Responsible and prudent use of antimicrobials is suggested to reduce the selective pressures that favour the spread of AMR determinants. Further studies to understand the evolution of R plasmids and their contribution to the dissemination of AMR genes are warranted.
Keyphrases
  • escherichia coli
  • antimicrobial resistance
  • klebsiella pneumoniae
  • biofilm formation
  • genetic diversity
  • risk factors
  • cystic fibrosis
  • preterm infants