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The complete chloroplast genome of Thermopsis lanceolata : genome structure and its phylogenetic relationships within the family Fabaceae.

Tashi DorjeeFei GaoYijun Zhou
Published in: Mitochondrial DNA. Part B, Resources (2022)
Thermopsis lanceolata R. Br. belongs to the genus Thermopsis , Fabaceae. The alkaloids of T. lanceolata have anti-cancer, anti-heart rate disorders and other pharmacological effects. To explore the chloroplast genome of T. lanceolata and its phylogenetic relationship, a complete chloroplast genome of T. lanceolata was sequenced and annotated, and a phylogenetic tree was constructed. The complete chloroplast genome of T. lanceolata is a circular molecule of 151,526 bp, consisting of a large single copy (LSC) region of 83,780 bp, a small single copy (SSC) region of 15,566 bp, and a pair of inverted repeats (IRa and IRb) of 26,090 bp. The chloroplast genome of T. lanceolata contained 130 genes, including 85 protein-coding genes, 37 transfer RNA genes, and 8 ribosomal RNA genes. Phylogenetic analysis revealed a close relationship between T. lanceolata and T. turkestanica .
Keyphrases
  • genome wide
  • heart rate
  • arabidopsis thaliana
  • dna methylation
  • bioinformatics analysis
  • genome wide identification
  • heart rate variability
  • single cell
  • binding protein
  • amino acid