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Heterogeneous pseudobulk simulation enables realistic benchmarking of cell-type deconvolution methods.

Mengying HuMaria Chikina
Published in: Genome biology (2024)
Our heterogeneous bulk simulation method and the entire benchmarking framework is implemented in a user friendly package https://github.com/humengying0907/deconvBenchmarking and https://doi.org/10.5281/zenodo.8206516 , enabling further developments in deconvolution methods.
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