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Drug knowledge discovery via multi-task learning and pre-trained models.

Dongfang LiYing XiongBaotian HuBuzhou TangWeihua PengQingcai Chen
Published in: BMC medical informatics and decision making (2021)
Experimental results on the benchmark annotation of genes with active mutation-centric function changes corpus show that integrating pre-trained biomedical language representation models (i.e., BERT, NCBI BERT, ClinicalBERT, BioBERT) into a pipe of information extraction methods with multi-task learning can improve the ability to collect mutation-disease knowledge from PubMed.
Keyphrases
  • healthcare
  • resistance training
  • small molecule
  • autism spectrum disorder
  • genome wide
  • high throughput
  • health information
  • body composition
  • dna methylation
  • high intensity
  • bioinformatics analysis
  • genome wide analysis