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Computation of protein-ligand binding free energies using quantum mechanical bespoke force fields.

Daniel J ColeIsrael Cabeza de VacaWilliam L Jorgensen
Published in: MedChemComm (2019)
A quantum mechanical bespoke molecular mechanics force field is derived for the L99A mutant of T4 lysozyme and used to compute absolute binding free energies of six benzene analogs to the protein. Promising agreement between theory and experiment highlights the potential for future use of system-specific force fields in computer-aided drug design.
Keyphrases
  • current status
  • single molecule
  • molecular dynamics
  • density functional theory
  • binding protein
  • protein protein
  • amino acid
  • dna binding
  • climate change