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Precision RNAi using synthetic shRNAmir target sites.

Thomas HoffmannAlexandra HörmannMaja CorcokovicJakub ZmajkovicMatthias HinterndorferJasko SalkanovicFiona SpreitzerAnna KöferleKatrin GitschtalerAlexandra PopaSarah OberndorferFlorian AnderschMarkus SchaeferMichaela FellnerNicole BudanoJan G RuppertPaolo ChettaMelanie WurmJohannes ZuberRalph A Neumüller
Published in: eLife (2023)
Loss-of-function genetic tools are widely applied for validating therapeutic targets, but their utility remains limited by incomplete on- and uncontrolled off-target effects. We describe artificial RNA interference (ARTi) based on synthetic, ultra-potent, off-target-free shRNAs that enable efficient and inducible suppression of any gene upon introduction of a synthetic target sequence into non-coding transcript regions. ARTi establishes a scalable loss-of-function tool with full control over on- and off-target effects.
Keyphrases
  • transcription factor
  • mass spectrometry
  • rna seq
  • anti inflammatory
  • nucleic acid