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Synthesis of a Hemispherical Geodesic Phenine Framework by a Polygon Assembling Strategy.

Tatsuru MioKoki IkemotoSota SatoHiroyuki Isobe
Published in: Angewandte Chemie (International ed. in English) (2020)
A synthetic strategy to construct large geodesic structures of phenine (1,3,5-trisubstituted benzene) was devised. In this strategy, five pentagons were assembled on an omphalos pentagon, and bridging peripheral pentagons furnished five additional hexagons. Thirty phenine units were synthetically assembled to afford a large C220 H180 molecule with a phenine framework isoreticular to a hemispherical, bisected segment of C60 . Although a hemispherical structure of the phenine framework was suggested by solution-phase NMR spectra, crystallographic analysis revealed an oval-like deformation of the molecular shape. In-depth structural analyses, including theoretical calculations, showed that structural fluctuations observed as variations in the biaryl torsion angles allowed structural deformations and, at the same time, that the dynamic fluctuations resulted in the spectroscopic observation of a hemisphere as a time-averaged structure.
Keyphrases
  • high resolution
  • density functional theory
  • magnetic resonance
  • molecular docking
  • molecular dynamics
  • single cell
  • molecular dynamics simulations
  • optical coherence tomography