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Functional analysis of cyclic diguanylate-modulating proteins in Vibrio fischeri .

Ruth Y IsenbergChandler S HolschbachJing GaoMark J Mandel
Published in: bioRxiv : the preprint server for biology (2023)
colonization of its Hawaiian bobtail squid host presents a tractable model in which to interrogate the role of c-di-GMP during animal colonization. This work provides systems-level characterization of the 50 proteins predicted to modulate c-di-GMP levels. By combining multiple assays, we generated a rich understanding of which proteins have the capacity to influence c-di-GMP levels and behaviors. Our functional approach yielded insights into how proteins with domains to both synthesize and degrade c-di-GMP may impact bacterial behaviors. Finally, we integrated published data to provide a broader picture of each of the 50 proteins analyzed. This study will inform future work to define specific pathways by which c-di-GMP regulates symbiotic behaviors and transitions.
Keyphrases
  • biofilm formation
  • pseudomonas aeruginosa
  • staphylococcus aureus
  • candida albicans
  • escherichia coli
  • cystic fibrosis
  • systematic review
  • electronic health record
  • big data
  • current status
  • artificial intelligence